CDS

Accession Number TCMCG042C41825
gbkey CDS
Protein Id XP_016473961.1
Location join(4797..4894,8551..8689,8844..9014,9129..9284,9411..9517,9655..9745,9862..10003,10665..10824,10942..11058,11153..11279,11929..12165)
Gene LOC107795783
GeneID 107795783
Organism Nicotiana tabacum

Protein

Length 514aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016618475.1
Definition PREDICTED: rhamnogalacturonate lyase-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category S
Description rhamnogalacturonan endolyase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016837        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0042737        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045490        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTCACGGGTGCACCATTCAAGGTATTACCAGAAACTCTTCCTTAATTTCTTTTCTTTTTAAATATGTGAATTATGTATTCAGATTAAAAGAACATAGGTTCCATTATATGGCAATATCAGACGATAGGCAAAGGGTGATGCCATCAGAAGAGGATCGCGCAAGTGGCCAAGTACTTGATTTTAAAGAAGCTGTTAAACTCACAAATCCTTCCAACCCTAAACTCAAAGATGAGGTGGATGACAAATACCAATACTCGGATGAGATTAAAAATATTAAAGTACATGGATGGATAGGTGATACTCCACATATGGGGTTTTGGGTAATCTCACCAAGTTATGAATATTGCAATGGTGGTCCTATGAAGCAAGATCTTTCTTCTCACGTTGGTCCAACATCCATGGCAGTATTTTTCAGTAGTCATTATGCAGCACCACTATTGGGAGTTTCACTAACAAATGGAGAGGCATATTGGAAAAAGGTTTTTGGTCCTGTATTTTTCTATGTTAACTCAGATTCTGGCATTGATCATACCGTACTTTGGGAAGATGCCAAAAGACAGATGAATGAAGAAACTACAAAATGGCCATATGACTTCCCAGCATCAATAGACTATCCCCATGCAAATGAACGCGGTTCAGTTAGTGGTCAATTAATGGTCCATGACGGGTACATAAACAAAGATCTTTTTCCTGCAAAAAATGCATATATTGGACTTGCCAATCCTGGAGTTGCAGGATCTTGGCAAAGTGAGACCAAGGGTTATCAATTTTGGACTCAAACTGATGATTCTGGTAACTTCAAGATAAGTAATGTTAGACCTGGAGTTTATGGCGTATATTCTTGGGTTCCTGGAGTTATTGGAGATTACATGTTCTCCTCTTATATATCCATTACGCCAGGAAATAACATAGATTTAGGTCAAATAGTTTTTGAAGCTCCAAGAAATGGTCCAACTCTATGGGAAATTGGCTTCCCTGATAGAACTGCTGCTGAATTTTTTATACCTGATCCATTGCCTGGTCTTCAGAATTATTTGTACATTAACACTACTGTACATAAGTTTAGACAATATGGTTTGTGGAATCGTTATGCGGATTTGTATCCTAATGGAGATTTAGTATACAAAGTTGGTGTTAGTGATTTTCGAAAAGATTGGTTCTTTGCCCATGTAACCAGGAGAAATTTGGACAATACTTATGGACCAACAACATGGCAAATTTCATTTGATCTCACAAATGTGGATCCTAATGGCATTTACTATCTTCGTATAGCCTTGGCTTCTGCATCCTATGGCCATTTGCAAGTGTGGATAAACACTCCCTCAAAACCAAGGCCATGGTTTGATACTTTACAAATTGGGCAAAGTAATGCAATAGCCAGACATGGAATTCATGGCTTGTATATGACCTTCGATATTCAATTTCCAGGGAATATACTTCAAATTGGTGAAAATATAATATATTTGAAGCAAGCTTCAGCTAATGGTCCTTTTAATGGACTAATGTATGACTATATTCGTCTTGAAGGACCTCCACAATAA
Protein:  
MVHGCTIQGITRNSSLISFLFKYVNYVFRLKEHRFHYMAISDDRQRVMPSEEDRASGQVLDFKEAVKLTNPSNPKLKDEVDDKYQYSDEIKNIKVHGWIGDTPHMGFWVISPSYEYCNGGPMKQDLSSHVGPTSMAVFFSSHYAAPLLGVSLTNGEAYWKKVFGPVFFYVNSDSGIDHTVLWEDAKRQMNEETTKWPYDFPASIDYPHANERGSVSGQLMVHDGYINKDLFPAKNAYIGLANPGVAGSWQSETKGYQFWTQTDDSGNFKISNVRPGVYGVYSWVPGVIGDYMFSSYISITPGNNIDLGQIVFEAPRNGPTLWEIGFPDRTAAEFFIPDPLPGLQNYLYINTTVHKFRQYGLWNRYADLYPNGDLVYKVGVSDFRKDWFFAHVTRRNLDNTYGPTTWQISFDLTNVDPNGIYYLRIALASASYGHLQVWINTPSKPRPWFDTLQIGQSNAIARHGIHGLYMTFDIQFPGNILQIGENIIYLKQASANGPFNGLMYDYIRLEGPPQ